Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790646.1_cds_XP_016502901.1_1563
CDS Infomation

[gene=LOC107821020] [db_xref=GeneID:107821020] [protein=shaggy-related protein kinase epsilon-like] [protein_id=XP_016502901.1] [location=join(23069..23128,23557..23811,23914..24006,24108..24167,24278..24550,24680..24754,24906..24962,25040..25180,25474..25524,25630..25725,25877..25960,26195..26297,26387..26448)] [gbkey=CDS]
Sequence

ATGAATGTGATGCGACGCCTCAAGAGCATTGCTTCTGGTCGATCTTCCGTTTCGGATCCT
GGTGGAGATTTTAGCCTAAAGAAAGTAACGGTTGAGCAGGAAGTAGATCACAGGGTCGAT
GGTGAAACTCAATTAGAAGAGCAATGTACTATAGCTCCTAAGCAGGATGTGACTTCTACA
TCTGAGGAAAGTACTGTATGTACATTGAATGTTGATACTAGACCAGAAAAATCTAGATAT
GAGGAGCTTCCAAAGGAAATGAATGAAATGAAAATTAGAGACGAAAAGACTAATGGACAC
GAGGATGACATAAAGGATATGGAGCCTGCTGTTGTTAGTGGTAATGGAACAGAAACGGGT
CAGATAATCGTGACTACTTTGAGTGGTCGAAATGGACGGCAGAAAAAGACGCTGTCTTAC
ATGGCTGAACGTGTGGTGGGTACGGGTTCATTTGGAGTTGTATTTCAGGCTAAGTGCCTT
GAAACAGGTGAATCTGTCGCAATAAAGAAGGTTTTACAGGATAGGAGATACAAGAACAGG
GAACTACAGATTGTGCGCATGCTTGATCATCCTAATGTTGTTCACTTGAGACACTGTTTC
TATTCTACTACTGAGAAGAATGAGGTTTACCTTAACCTTGTTTTGGAGTATATGTCTGAA
ACTGTTTACCGAGTTTCAAGGCACTACAGCCGAGTGAACCATCACATGCCCATCATATAT
GTTCAACTGTACACGTACCAGCTATGTCGGGCTCTGAATTACATGCACAACGTAACTGGC
GTATGTCACCGTGATATTAAACCTCAGAATCTTTTGGTTAATCCCCACACCCATCAGTTA
AAGATTTGTGACTTTGGAAGTGCAAAGATGTTGGTGCCTGGGGAGCCCAATATATCCTAC
ATTTGTTCTCGGTATTATAGGGCGCCTGAATTGATCTTTGGGGCTACAGAATACACAAAT
GCAATTGATATCTGGTCAGCTGGTTGCGTTTTCGCTGAGCTACTTTTGGGACAGCCTCTT
TTCCCTGGAGAAAGTGGCGTCGATCAGCTGGCGGAGATCATCAAGATTTTGGGGACACCA
ACTAGAGAGGAAATTAGGCGCATGAATCCAAACTATAAAGAGTTCAAGTTTCCTCAAATG
AAAGCTCACCCATGGCATAAGATATTTAATAGAAGAATACCTCCTGAAGCAGTAGATTTG
GCATCAAGACTGCTCCAGTATTCTCCAACTCTACGTTGTACTGCTTTGGAGGCATGTGCA
CACCCTTTCTTCAATGCTCTGAGGGAACCAAATGCTTGCTTGCCAAATGGGCGACCGTTG
CCACCTCTATTCAATTTTACACCCCAAGAGCTTTCTGGTGCATCTACTGAACTGAGACAA
CGCCTCATTCCTGAGTACATGAGGAAATGA

Peptide Sequence

PEP ID

XP_016502901.1
PEP Infomation

PREDICTED: shaggy-related protein kinase epsilon-like [Nicotiana tabacum]
Sequence

MNVMRRLKSIASGRSSVSDPGGDFSLKKVTVEQEVDHRVDGETQLEEQCTIAPKQDVTST
SEESTVCTLNVDTRPEKSRYEELPKEMNEMKIRDEKTNGHEDDIKDMEPAVVSGNGTETG
QIIVTTLSGRNGRQKKTLSYMAERVVGTGSFGVVFQAKCLETGESVAIKKVLQDRRYKNR
ELQIVRMLDHPNVVHLRHCFYSTTEKNEVYLNLVLEYMSETVYRVSRHYSRVNHHMPIIY
VQLYTYQLCRALNYMHNVTGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISY
ICSRYYRAPELIFGATEYTNAIDIWSAGCVFAELLLGQPLFPGESGVDQLAEIIKILGTP
TREEIRRMNPNYKEFKFPQMKAHPWHKIFNRRIPPEAVDLASRLLQYSPTLRCTALEACA
HPFFNALREPNACLPNGRPLPPLFNFTPQELSGASTELRQRLIPEYMRK

Transcript Sequence

Gene sequence data has not been registered.